Plot network using threejs::graphjs — draw

Interactive plotting of an igraph net using threejs.

Usage

draw_graphjs(
  net,
  vertex_size = 1,
  vertex_col = NULL,
  vertex_label_col = NULL,
  vertex_label_alpha = 0.66,
  vertex_frame_col = NA,
  vertex_label = NULL,
  vertex_shape = "circle",
  edge_col = NULL,
  edge_alpha = 0.5,
  edge_curved = 0.35,
  edge_width = 2,
  layout = c("fr", "dh", "drl", "gem", "graphopt", "kk", "lgl", "mds", "sugiyama"),
  coords = NULL,
  layout_params = list(),
  cluster = NULL,
  groups = NULL,
  cluster_params = list(),
  cluster_mark_groups = TRUE,
  cluster_color_vertices = FALSE,
  main = "",
  theme = rtemis_theme,
  theme_extra_args = list(),
  palette = rtemis_palette,
  mar = rep(0, 4),
  par_reset = TRUE,
  filename = NULL,
  verbosity = 1L,
  ...
)

Arguments

net: igraph network.
vertex_size: Numeric: Vertex size.
vertex_col: Color for vertices.
vertex_label_col: Color for vertex labels.
vertex_label_alpha: Numeric: Transparency for vertex_label_col.
vertex_frame_col: Color for vertex border (frame).
vertex_label: Character vector: Vertex labels. Default = NULL, which will keep existing names in net if any. Set to NA to avoid printing vertex labels.
vertex_shape: Character, vector, length 1 or N nodes: Vertex shape. See graphjs("vertex_shape").
edge_col: Color for edges.
edge_alpha: Numeric: Transparency for edges.
edge_curved: Numeric: Curvature of edges.
edge_width: Numeric: Edge thickness.
layout: Character: one of: "fr", "dh", "drl", "gem", "graphopt", "kk", "lgl", "mds", "sugiyama", corresponding to all the available layouts in igraph.
coords: Output of precomputed igraph layout. If provided, layout is ignored.
layout_params: List of parameters to pass to layout function.
cluster: Character: one of: "edge_betweenness", "fast_greedy", "infomap", "label_prop", "leading_eigen", "louvain", "optimal", "spinglass", "walktrap", corresponding to all the available igraph clustering functions.
groups: Output of precomputed igraph clustering. If provided, cluster is ignored.
cluster_params: List of parameters to pass to cluster function.
cluster_mark_groups: Logical: If TRUE, draw polygons to indicate clusters, if groups or cluster are defined.
cluster_color_vertices: Logical: If TRUE, color vertices by cluster membership.
main: Character: Main title.
theme: rtemis theme to use.
theme_extra_args: List of extra arguments to pass to the theme function defined by theme.
palette: Color vector or name of rtemis palette.
mar: Numeric vector, length 4: par's margin argument.
par_reset: Logical: If TRUE, reset par before exiting.
filename: Character: If provided, save plot to this filepath.
verbosity: Integer: Verbosity level.
...: Extra arguments to pass to igraph::plot.igraph().

Value

A threejs graph object.

Author

EDG